Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain WCHEC000837 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Genome Summary
Escherichia coli strain WCHEC000837 plasmid pNDM4_000837, complete
Gene Summary
Adenine Count
11103 bp
Thymine Count
11055 bp
Guanine Count
11694 bp
Cytosine Count
11632 bp
Genome Length
45484 bp
Protein-coding Genes
32 genes
Non-Coding Genes
22 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| l-threonate dehydrogenase | D9N32_RS10500 | Not Available | Positive | 1708176 - 1709084 | 30692.0 |
| 3-oxo-tetronate kinase | D9N32_RS10505 | Not Available | Positive | 1709081 - 1710343 | 44910.6 |
| aldolase | D9N32_RS10510 | Not Available | Positive | 1710340 - 1710978 | 23223.8 |
| hpr family phosphocarrier protein | D9N32_RS10515 | Not Available | Positive | 1710983 - 1711759 | 29219.5 |
| gntp family transporter | D9N32_RS10520 | Not Available | Positive | 1711848 - 1713212 | 46763.6 |
| non-oxidative hydroxyarylic acid decarboxylases subunit d | D9N32_RS10525 | Not Available | Negative | 1713251 - 1713487 | 9180.06 |
| non-oxidative hydroxyarylic acid decarboxylases subunit c | D9N32_RS10530 | Not Available | Negative | 1713498 - 1714925 | 52397.8 |
| non-oxidative hydroxyarylic acid decarboxylases subunit b | D9N32_RS10535 | Not Available | Negative | 1714925 - 1715518 | 21529.3 |
| marr family winged helix-turn-helix transcriptional regulator | D9N32_RS10540 | Not Available | Positive | 1715665 - 1716072 | 15497.9 |
| rna polymerase sigma factor rpos | D9N32_RS10545 | Not Available | Negative | 1716193 - 1717185 | 37975.1 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





