Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain WCHEC000837 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Genome Summary
Escherichia coli strain WCHEC000837 plasmid pNDM4_000837, complete
Gene Summary
Adenine Count
11103 bp
Thymine Count
11055 bp
Guanine Count
11694 bp
Cytosine Count
11632 bp
Genome Length
45484 bp
Protein-coding Genes
32 genes
Non-Coding Genes
22 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycine betaine/l-proline abc transporter substrate-binding protein prox | D9N32_RS10205 | Not Available | Positive | 1652556 - 1653548 | 35952.3 |
| mfs transporter | D9N32_RS10210 | Not Available | Positive | 1654001 - 1655185 | 41657.9 |
| l-valine exporter subunit ygaz | D9N32_RS10215 | Not Available | Positive | 1655309 - 1656046 | 26095.1 |
| l-valine transporter subunit ygah | D9N32_RS10220 | Not Available | Positive | 1656036 - 1656371 | 12010.3 |
| multidrug efflux transporter emrab transcriptional repressor emrr | D9N32_RS10225 | Not Available | Positive | 1656462 - 1656992 | 20564.7 |
| multidrug efflux mfs transporter periplasmic adaptor subunit emra | D9N32_RS10230 | Not Available | Positive | 1657119 - 1658291 | 42724.5 |
| multidrug efflux mfs transporter permease subunit emrb | D9N32_RS10235 | Not Available | Positive | 1658308 - 1659846 | 55627.7 |
| s-ribosylhomocysteine lyase | D9N32_RS10240 | Not Available | Negative | 1659910 - 1660425 | 19417.3 |
| glutamate--cysteine ligase | D9N32_RS10245 | Not Available | Negative | 1660575 - 1662131 | 58380.7 |
| yqaa family protein | D9N32_RS10250 | Not Available | Negative | 1662204 - 1662632 | 15590.6 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





