Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain WCHEC000837 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Genome Summary
Escherichia coli strain WCHEC000837 plasmid pNDM4_000837, complete
Gene Summary
Adenine Count
11103 bp
Thymine Count
11055 bp
Guanine Count
11694 bp
Cytosine Count
11632 bp
Genome Length
45484 bp
Protein-coding Genes
32 genes
Non-Coding Genes
22 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ribosome-associated translation inhibitor raia | D9N32_RS09950 | Not Available | Positive | 1604501 - 1604842 | 12785.3 |
| phea operon leader peptide phel | D9N32_RS09955 | Not Available | Positive | 1604946 - 1604993 | 1912.35 |
| bifunctional chorismate mutase/prephenate dehydratase | D9N32_RS09960 | Not Available | Positive | 1605092 - 1606252 | 43156.9 |
| bifunctional chorismate mutase/prephenate dehydrogenase | D9N32_RS09965 | Not Available | Negative | 1606295 - 1607416 | 42025.9 |
| 3-deoxy-7-phosphoheptulonate synthase arof | D9N32_RS09970 | Not Available | Negative | 1607427 - 1608497 | 38820.3 |
| duf2799 domain-containing protein | D9N32_RS09975 | Not Available | Positive | 1608707 - 1609072 | 13234.4 |
| yfir family protein | D9N32_RS09980 | Not Available | Positive | 1609222 - 1609740 | 19007.2 |
| diguanylate cyclase dgcn | D9N32_RS09985 | Not Available | Positive | 1609730 - 1610956 | 45926.0 |
| ompa family protein | D9N32_RS09990 | Not Available | Positive | 1610972 - 1611454 | 17273.6 |
| 50s ribosomal protein l19 | D9N32_RS09995 | Not Available | Negative | 1611531 - 1611878 | 13134.0 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





