Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain WCHEC000837 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Genome Summary
Escherichia coli strain WCHEC000837 plasmid pNDM4_000837, complete
Gene Summary
Adenine Count
11103 bp
Thymine Count
11055 bp
Guanine Count
11694 bp
Cytosine Count
11632 bp
Genome Length
45484 bp
Protein-coding Genes
32 genes
Non-Coding Genes
22 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lysr family transcriptional regulator | D9N32_RS09840 | Not Available | Negative | 1580396 - 1581277 | 33227.2 |
| cysteine/o-acetylserine transporter | D9N32_RS09845 | Not Available | Positive | 1581380 - 1581967 | 21260.6 |
| autonomous glycyl radical cofactor grca | D9N32_RS09850 | Not Available | Negative | 1582029 - 1582412 | 14269.0 |
| uracil-dna glycosylase | D9N32_RS09855 | Not Available | Positive | 1582717 - 1583406 | 25709.7 |
| trna/rrna methyltransferase | D9N32_RS09860 | Not Available | Negative | 1583454 - 1584491 | 37853.5 |
| thioredoxin trxc | D9N32_RS09870 | Not Available | Positive | 1584698 - 1585117 | 15555.6 |
| pp_01526 | D9N32_RS09875 | Not Available | Positive | 1585186 - 1585884 | Not Available |
| peptidyl-lysine n-acetyltransferase patz | D9N32_RS09880 | Not Available | Positive | 1585916 - 1588576 | 97978.1 |
| cdp-diacylglycerol--serine o-phosphatidyltransferase | D9N32_RS09885 | Not Available | Positive | 1588690 - 1590045 | 52804.8 |
| yfim family lipoprotein | D9N32_RS09890 | Not Available | Positive | 1590091 - 1590414 | 11807.9 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





