Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain WCHEC000837 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Genome Summary
Escherichia coli strain WCHEC000837 plasmid pNDM4_000837, complete
Gene Summary
Adenine Count
11103 bp
Thymine Count
11055 bp
Guanine Count
11694 bp
Cytosine Count
11632 bp
Genome Length
45484 bp
Protein-coding Genes
32 genes
Non-Coding Genes
22 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| trna adenosine(34) deaminase tada | D9N32_RS09740 | Not Available | Negative | 1563486 - 1563989 | 18717.7 |
| phosphatidylglycerophosphatase c | D9N32_RS09745 | Not Available | Negative | 1564047 - 1564682 | 24451.8 |
| murr/rpir family transcriptional regulator | D9N32_RS09750 | Not Available | Positive | 1564891 - 1565739 | 30709.3 |
| 4fe-4s dicluster ferredoxin yfhl | D9N32_RS09755 | Not Available | Positive | 1565795 - 1566055 | 9848.85 |
| type i toxin-antitoxin system toxin shob | D9N32_RS09760 | Not Available | Negative | 1566250 - 1566330 | 3103.22 |
| holo-acp synthase | D9N32_RS09770 | Not Available | Negative | 1566750 - 1567130 | 14125.2 |
| pyridoxine 5'-phosphate synthase | D9N32_RS09775 | Not Available | Negative | 1567130 - 1567861 | 26369.9 |
| dna repair protein reco | D9N32_RS09780 | Not Available | Negative | 1567873 - 1568601 | 27392.2 |
| gtpase era | D9N32_RS09785 | Not Available | Negative | 1568613 - 1569518 | 33798.1 |
| ribonuclease iii | D9N32_RS09790 | Not Available | Negative | 1569515 - 1570195 | 25551.6 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





