Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain WCHEC000837 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Genome Summary
Escherichia coli strain WCHEC000837 plasmid pNDM4_000837, complete
Gene Summary
Adenine Count
11103 bp
Thymine Count
11055 bp
Guanine Count
11694 bp
Cytosine Count
11632 bp
Genome Length
45484 bp
Protein-coding Genes
32 genes
Non-Coding Genes
22 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fe-s cluster assembly scaffold iscu | D9N32_RS09590 | Not Available | Negative | 1526352 - 1526738 | 13849.3 |
| cysteine desulfurase | D9N32_RS09595 | Not Available | Negative | 1526766 - 1527980 | 45092.2 |
| fe-s cluster assembly transcriptional regulator iscr | D9N32_RS09600 | Not Available | Negative | 1528092 - 1528580 | 17337.6 |
| trna (cytosine(32)/uridine(32)-2'-o)-methyltransferase trmj | D9N32_RS09605 | Not Available | Negative | 1528850 - 1529590 | 27049.6 |
| inositol-1-monophosphatase | D9N32_RS09610 | Not Available | Positive | 1529709 - 1530512 | 29173.8 |
| alpha/beta hydrolase | D9N32_RS09615 | Not Available | Positive | 1530657 - 1531511 | 31584.8 |
| stationary phase inducible protein csie | D9N32_RS09620 | Not Available | Positive | 1531702 - 1532982 | 49064.4 |
| 3-phenylpropionate mfs transporter | D9N32_RS09625 | Not Available | Negative | 1532974 - 1534113 | 41597.2 |
| dna-binding transcriptional regulator hcar | D9N32_RS09630 | Not Available | Negative | 1534273 - 1535163 | 32813.2 |
| 3-phenylpropionate/cinnamic acid dioxygenase subunit alpha | D9N32_RS09635 | Not Available | Positive | 1535299 - 1536660 | 51111.8 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





