Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain WCHEC000837 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Genome Summary
Escherichia coli strain WCHEC000837 plasmid pNDM4_000837, complete
Gene Summary
Adenine Count
11103 bp
Thymine Count
11055 bp
Guanine Count
11694 bp
Cytosine Count
11632 bp
Genome Length
45484 bp
Protein-coding Genes
32 genes
Non-Coding Genes
22 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| alpha2-macroglobulin | D9N32_RS09545 | Not Available | Negative | 1513978 - 1518936 | 181483.0 |
| 3-mercaptopyruvate sulfurtransferase | D9N32_RS09550 | Not Available | Positive | 1519143 - 1519988 | 30881.5 |
| small toxic inner membrane protein timp | D9N32_RS28080 | Not Available | Positive | 1520591 - 1520716 | 4531.63 |
| enhanced serine sensitivity protein sseb | D9N32_RS09555 | Not Available | Negative | 1520748 - 1521524 | 28628.1 |
| aminopeptidase pepb | D9N32_RS09560 | Not Available | Negative | 1521643 - 1522926 | 46284.7 |
| fe-s cluster assembly protein iscx | D9N32_RS09565 | Not Available | Negative | 1522985 - 1523185 | 7731.92 |
| isc system 2fe-2s type ferredoxin | D9N32_RS09570 | Not Available | Negative | 1523197 - 1523532 | 12359.5 |
| fe-s protein assembly chaperone hsca | D9N32_RS09575 | Not Available | Negative | 1523534 - 1525384 | 65686.3 |
| co-chaperone hscb | D9N32_RS09580 | Not Available | Negative | 1525401 - 1525916 | 20085.8 |
| iron-sulfur cluster assembly protein isca | D9N32_RS09585 | Not Available | Negative | 1526012 - 1526335 | 11556.7 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





