Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain WCHEC000837 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Genome Summary
Escherichia coli strain WCHEC000837 plasmid pNDM4_000837, complete
Gene Summary
Adenine Count
11103 bp
Thymine Count
11055 bp
Guanine Count
11694 bp
Cytosine Count
11632 bp
Genome Length
45484 bp
Protein-coding Genes
32 genes
Non-Coding Genes
22 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| zinc ribbon domain-containing protein | D9N32_RS09495 | Not Available | Negative | 1502258 - 1502473 | 7791.46 |
| ribosome biogenesis gtpase der | D9N32_RS09500 | Not Available | Negative | 1502536 - 1504008 | 55026.1 |
| outer membrane protein assembly factor bamb | D9N32_RS09505 | Not Available | Negative | 1504126 - 1505304 | 41889.6 |
| ancillary secyeg translocon subunit yfgm | D9N32_RS09510 | Not Available | Negative | 1505315 - 1505935 | 22177.2 |
| histidine--trna ligase | D9N32_RS09515 | Not Available | Negative | 1505953 - 1507227 | 47032.2 |
| flavodoxin-dependent (e)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase | D9N32_RS09520 | Not Available | Negative | 1507338 - 1508456 | 40700.1 |
| cytoskeleton protein rodz | D9N32_RS09525 | Not Available | Negative | 1508483 - 1509496 | 36176.5 |
| bifunctional trna (adenosine(37)-c2)-methyltransferase trmg/ribosomal rna large subunit methyltransferase rlmn | D9N32_RS09530 | Not Available | Negative | 1509781 - 1510935 | 43088.0 |
| nucleoside-diphosphate kinase | D9N32_RS09535 | Not Available | Negative | 1511085 - 1511516 | 15464.3 |
| peptidoglycan glycosyltransferase pbpc | D9N32_RS09540 | Not Available | Negative | 1511665 - 1513977 | 84936.7 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





