Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain WCHEC000837 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Genome Summary
Escherichia coli strain WCHEC000837 plasmid pNDM4_000837, complete
Gene Summary
Adenine Count
11103 bp
Thymine Count
11055 bp
Guanine Count
11694 bp
Cytosine Count
11632 bp
Genome Length
45484 bp
Protein-coding Genes
32 genes
Non-Coding Genes
22 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| n-acetylmuramic acid 6-phosphate etherase | D9N32_RS09080 | Not Available | Positive | 1407097 - 1407993 | 31129.7 |
| pts n-acetylmuramic acid transporter subunit iibc | D9N32_RS09085 | Not Available | Positive | 1407997 - 1409421 | 49815.1 |
| penicillin binding protein pbp4b | D9N32_RS09090 | Not Available | Positive | 1409426 - 1410727 | 47539.8 |
| is200/is605-like element is200c family transposase | D9N32_RS09105 | Not Available | Negative | 1410838 - 1411296 | 18028.0 |
| porphyrinogen peroxidase | D9N32_RS09115 | Not Available | Negative | 1411496 - 1412395 | 33086.2 |
| rpoe-regulated lipoprotein | D9N32_RS09120 | Not Available | Negative | 1412491 - 1413066 | 20830.6 |
| duf2919 domain-containing protein | D9N32_RS09125 | Not Available | Negative | 1413127 - 1413576 | 17129.3 |
| gnat family acetyltransferase | D9N32_RS09130 | Not Available | Negative | 1413563 - 1413988 | 16326.6 |
| n-acetylmuramoyl-l-alanine amidase amia | D9N32_RS09135 | Not Available | Positive | 1414202 - 1415071 | 31409.9 |
| oxygen-dependent coproporphyrinogen oxidase | D9N32_RS09140 | Not Available | Positive | 1415075 - 1415974 | 34352.4 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





