Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain WCHEC000837 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Genome Summary
Escherichia coli strain WCHEC000837 plasmid pNDM4_000837, complete
Gene Summary
Adenine Count
11103 bp
Thymine Count
11055 bp
Guanine Count
11694 bp
Cytosine Count
11632 bp
Genome Length
45484 bp
Protein-coding Genes
32 genes
Non-Coding Genes
22 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pts glucose transporter subunit iia | D9N32_RS09030 | Not Available | Positive | 1398251 - 1398760 | 18252.1 |
| pyridoxine/pyridoxal/pyridoxamine kinase | D9N32_RS09035 | Not Available | Negative | 1398802 - 1399653 | 30862.2 |
| yfek family protein | D9N32_RS09040 | Not Available | Positive | 1399758 - 1400126 | 13622.6 |
| cysteine synthase b | D9N32_RS09045 | Not Available | Negative | 1400129 - 1401040 | 32605.2 |
| sulfate/thiosulfate abc transporter atp-binding protein cysa | D9N32_RS09050 | Not Available | Negative | 1401174 - 1402271 | 41061.4 |
| sulfate/thiosulfate abc transporter permease cysw | D9N32_RS09055 | Not Available | Negative | 1402261 - 1403136 | 32539.6 |
| sulfate/thiosulfate abc transporter permease cyst | D9N32_RS09060 | Not Available | Negative | 1403136 - 1403969 | 30310.5 |
| thiosulfate/sulfate abc transporter substrate-binding protein cysp | D9N32_RS09065 | Not Available | Negative | 1403969 - 1404985 | 37644.6 |
| sdr family oxidoreductase ucpa | D9N32_RS09070 | Not Available | Negative | 1405156 - 1405947 | 27865.7 |
| hth-type transcriptional regulator murr | D9N32_RS09075 | Not Available | Negative | 1406076 - 1406933 | 31326.8 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





