Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain WCHEC000837 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Genome Summary
Escherichia coli strain WCHEC000837 plasmid pNDM4_000837, complete
Gene Summary
Adenine Count
11103 bp
Thymine Count
11055 bp
Guanine Count
11694 bp
Cytosine Count
11632 bp
Genome Length
45484 bp
Protein-coding Genes
32 genes
Non-Coding Genes
22 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| outer membrane protein ompk | D9N32_RS08980 | Not Available | Positive | 1387532 - 1388296 | 29233.5 |
| lysr family transcriptional regulator | D9N32_RS08985 | Not Available | Negative | 1388335 - 1389261 | 33890.1 |
| bile acid:sodium symporter family protein | D9N32_RS08990 | Not Available | Positive | 1389351 - 1390349 | 36426.9 |
| duf3820 family protein | D9N32_RS08995 | Not Available | Negative | 1390346 - 1390564 | 8415.57 |
| nad-dependent dna ligase liga | D9N32_RS09000 | Not Available | Negative | 1390566 - 1392581 | 73685.4 |
| cell division protein zipa | D9N32_RS09005 | Not Available | Negative | 1392652 - 1393650 | 36928.9 |
| sulfate transporter cysz | D9N32_RS09010 | Not Available | Positive | 1393880 - 1394641 | 29306.6 |
| cysteine synthase a | D9N32_RS09015 | Not Available | Positive | 1394826 - 1395797 | 34491.7 |
| phosphocarrier protein hpr | D9N32_RS09020 | Not Available | Positive | 1396181 - 1396438 | 9119.89 |
| phosphoenolpyruvate-protein phosphotransferase ptsi | D9N32_RS09025 | Not Available | Positive | 1396483 - 1398210 | 63537.5 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





