Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain WCHEC000837 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Genome Summary
Escherichia coli strain WCHEC000837 plasmid pNDM4_000837, complete
Gene Summary
Adenine Count
11103 bp
Thymine Count
11055 bp
Guanine Count
11694 bp
Cytosine Count
11632 bp
Genome Length
45484 bp
Protein-coding Genes
32 genes
Non-Coding Genes
22 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf2502 domain-containing protein ypec | D9N32_RS08880 | Not Available | Positive | 1373427 - 1373753 | 13263.4 |
| nramp family divalent metal transporter | D9N32_RS08885 | Not Available | Negative | 1373895 - 1375133 | 44196.5 |
| nucleoside permease nupc | D9N32_RS08890 | Not Available | Positive | 1375469 - 1376671 | 43478.4 |
| sensor domain-containing phosphodiesterase | D9N32_RS08895 | Not Available | Negative | 1376722 - 1378911 | 83621.2 |
| Trna-ala | Not Available | Not Available | Positive | 1379119 - 1379194 | Not Available |
| Trna-ala | Not Available | Not Available | Positive | 1379234 - 1379309 | Not Available |
| yfec-like transcriptional regulator | D9N32_RS08910 | Not Available | Positive | 1379530 - 1379889 | 13412.3 |
| tail fiber assembly protein | D9N32_RS08915 | Not Available | Positive | 1379891 - 1379998 | 4335.33 |
| is110-like element is4321 family transposase | D9N32_RS08920 | Not Available | Negative | 1380254 - 1381258 | 37442.6 |
| tail fiber assembly protein | D9N32_RS08925 | Not Available | Positive | 1381325 - 1381609 | 10638.7 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





