Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain WCHEC000837 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Genome Summary
Escherichia coli strain WCHEC000837 plasmid pNDM4_000837, complete
Gene Summary
Adenine Count
11103 bp
Thymine Count
11055 bp
Guanine Count
11694 bp
Cytosine Count
11632 bp
Genome Length
45484 bp
Protein-coding Genes
32 genes
Non-Coding Genes
22 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| coa:oxalate coa-transferase | D9N32_RS08775 | Not Available | Negative | 1350453 - 1351598 | 41638.1 |
| transporter yfdv | D9N32_RS08780 | Not Available | Negative | 1351672 - 1352616 | 33617.9 |
| oxalyl-coa decarboxylase | D9N32_RS08785 | Not Available | Negative | 1352685 - 1354379 | 60570.8 |
| formyl-coa transferase | D9N32_RS08790 | Not Available | Negative | 1354433 - 1355683 | 45816.7 |
| yfdx family protein | D9N32_RS08795 | Not Available | Negative | 1356195 - 1356827 | 22907.4 |
| colanic acid biosynthesis lipoprotein ypdi | D9N32_RS08800 | Not Available | Positive | 1357123 - 1357398 | 10125.4 |
| yfdy family protein | D9N32_RS08805 | Not Available | Negative | 1357475 - 1357717 | 8923.5 |
| kdo(2)-lipid iv(a) palmitoleoyltransferase | D9N32_RS08815 | Not Available | Positive | 1358070 - 1358990 | 35481.5 |
| membrane protein ypdk | D9N32_RS08820 | Not Available | Positive | 1359346 - 1359417 | 2704.57 |
| alanine transaminase | D9N32_RS08825 | Not Available | Negative | 1359482 - 1360720 | 46218.8 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





