Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain WCHEC000837 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Genome Summary
Escherichia coli strain WCHEC000837 plasmid pNDM4_000837, complete
Gene Summary
Adenine Count
11103 bp
Thymine Count
11055 bp
Guanine Count
11694 bp
Cytosine Count
11632 bp
Genome Length
45484 bp
Protein-coding Genes
32 genes
Non-Coding Genes
22 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| isochorismate synthase menf | D9N32_RS07970 | Not Available | Negative | 1203995 - 1205290 | 48744.4 |
| stress response protein elab | D9N32_RS07975 | Not Available | Negative | 1205369 - 1205674 | 11306.3 |
| gnat family n-acetyltransferase | D9N32_RS07980 | Not Available | Negative | 1205729 - 1206190 | 17466.8 |
| ribonuclease bn | D9N32_RS07985 | Not Available | Positive | 1206255 - 1207172 | 32891.5 |
| tail fiber assembly protein | D9N32_RS07990 | Not Available | Positive | 1207360 - 1208570 | 43879.7 |
| m28 family metallopeptidase | D9N32_RS07995 | Not Available | Positive | 1208951 - 1209922 | 35885.7 |
| yfbm family protein | D9N32_RS08000 | Not Available | Positive | 1210025 - 1210528 | 18992.8 |
| nadh-quinone oxidoreductase subunit nuon | D9N32_RS08005 | Not Available | Negative | 1210595 - 1212052 | 52047.3 |
| nadh-quinone oxidoreductase subunit m | D9N32_RS08010 | Not Available | Negative | 1212059 - 1213588 | 56583.0 |
| nadh-quinone oxidoreductase subunit l | D9N32_RS08015 | Not Available | Negative | 1213819 - 1215660 | 66412.1 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





