Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain WCHEC000837 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Genome Summary
Escherichia coli strain WCHEC000837 plasmid pNDM4_000837, complete
Gene Summary
Adenine Count
11103 bp
Thymine Count
11055 bp
Guanine Count
11694 bp
Cytosine Count
11632 bp
Genome Length
45484 bp
Protein-coding Genes
32 genes
Non-Coding Genes
22 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 4-deoxy-4-formamido-l-arabinose- phosphoundecaprenol deformylase | D9N32_RS07915 | Not Available | Positive | 1194665 - 1195555 | 33020.5 |
| lipid iv(a) 4-amino-4-deoxy-l-arabinosyltransferase | D9N32_RS07920 | Not Available | Positive | 1195555 - 1197207 | 62503.9 |
| 4-amino-4-deoxy-l-arabinose-phosphoundecaprenol flippase subunit arne | D9N32_RS07925 | Not Available | Positive | 1197204 - 1197539 | 12192.7 |
| 4-amino-4-deoxy-l-arabinose-phosphoundecaprenol flippase subunit arnf | D9N32_RS07930 | Not Available | Positive | 1197539 - 1197925 | 14058.0 |
| signal transduction protein pmrd | D9N32_RS07935 | Not Available | Negative | 1197919 - 1198185 | 9899.01 |
| o-succinylbenzoate--coa ligase | D9N32_RS07945 | Not Available | Negative | 1198295 - 1199650 | 50039.3 |
| o-succinylbenzoate synthase | D9N32_RS07950 | Not Available | Negative | 1199647 - 1200609 | 35401.5 |
| 1,4-dihydroxy-2-naphthoyl-coa synthase | D9N32_RS07955 | Not Available | Negative | 1200609 - 1201466 | 31604.8 |
| 2-succinyl-6-hydroxy-2, 4-cyclohexadiene-1-carboxylate synthase | D9N32_RS07960 | Not Available | Negative | 1201481 - 1202239 | 27838.2 |
| 2-succinyl-5-enolpyruvyl-6-hydroxy-3- cyclohexene-1-carboxylic-acid synthase | D9N32_RS07965 | Not Available | Negative | 1202236 - 1203906 | 61308.4 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





