Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain WCHEC000837 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Genome Summary
Escherichia coli strain WCHEC000837 plasmid pNDM4_000837, complete
Gene Summary
Adenine Count
11103 bp
Thymine Count
11055 bp
Guanine Count
11694 bp
Cytosine Count
11632 bp
Genome Length
45484 bp
Protein-coding Genes
32 genes
Non-Coding Genes
22 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| mfs transporter | D9N32_RS07865 | Not Available | Negative | 1183511 - 1184800 | 46196.4 |
| l-rhamnonate dehydratase | D9N32_RS07870 | Not Available | Negative | 1184857 - 1186062 | 44295.1 |
| iclr family transcriptional regulator | D9N32_RS07875 | Not Available | Negative | 1186077 - 1186859 | 28877.8 |
| nicotinamide mononucleotide deamidase-related protein yfay | D9N32_RS07880 | Not Available | Negative | 1187079 - 1188281 | 44272.3 |
| yfaz family outer membrane protein | D9N32_RS07885 | Not Available | Negative | 1188381 - 1188923 | 18596.8 |
| nucleoside triphosphatase nudi | D9N32_RS07890 | Not Available | Positive | 1189201 - 1189626 | 16343.6 |
| lipopolysaccharide core heptose(ii)-phosphate phosphatase ais | D9N32_RS07895 | Not Available | Negative | 1189665 - 1190267 | 22291.8 |
| udp-4-amino-4-deoxy-l-arabinose aminotransferase | D9N32_RS07900 | Not Available | Positive | 1190575 - 1191714 | 41609.2 |
| undecaprenyl-phosphate 4-deoxy-4-formamido-l-arabinose transferase | D9N32_RS07905 | Not Available | Positive | 1191718 - 1192686 | 36368.4 |
| bifunctional udp-4-amino-4-deoxy-l-arabinose formyltransferase/udp-glucuronic acid oxidase arna | D9N32_RS07910 | Not Available | Positive | 1192686 - 1194668 | 74218.0 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





