Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain WCHEC000837 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Genome Summary
Escherichia coli strain WCHEC000837 plasmid pNDM4_000837, complete
Gene Summary
Adenine Count
11103 bp
Thymine Count
11055 bp
Guanine Count
11694 bp
Cytosine Count
11632 bp
Genome Length
45484 bp
Protein-coding Genes
32 genes
Non-Coding Genes
22 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf1175 domain-containing protein | D9N32_RS07765 | Not Available | Negative | 1157206 - 1157829 | 23752.5 |
| duf2138 domain-containing protein | D9N32_RS07770 | Not Available | Negative | 1157826 - 1159514 | 62674.7 |
| dna topoisomerase (atp-hydrolyzing) subunit a | D9N32_RS07775 | Not Available | Negative | 1159663 - 1162290 | 96989.4 |
| bifunctional 2-polyprenyl-6-hydroxyphenol methylase/3-demethylubiquinol 3-o-methyltransferase ubig | D9N32_RS07780 | Not Available | Positive | 1162437 - 1163159 | 26557.0 |
| aida-i family autotransporter adhesin yfal/ehac | D9N32_RS07785 | Not Available | Negative | 1163220 - 1166978 | 131416.0 |
| protein ypab | D9N32_RS28295 | Not Available | Negative | 1167403 - 1167546 | 5295.47 |
| class 1a ribonucleoside-diphosphate reductase subunit alpha | D9N32_RS07795 | Not Available | Positive | 1167674 - 1169959 | 85722.9 |
| class ia ribonucleoside-diphosphate reductase subunit beta | D9N32_RS07800 | Not Available | Positive | 1170105 - 1171235 | 43519.6 |
| ferredoxin-like diferric-tyrosyl radical cofactor maintenance protein yfae | D9N32_RS07805 | Not Available | Positive | 1171235 - 1171489 | 9349.32 |
| lipopolysaccharide kinase inaa | D9N32_RS07810 | Not Available | Negative | 1171543 - 1172193 | 25313.5 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





