Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain WCHEC000837 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Genome Summary
Escherichia coli strain WCHEC000837 plasmid pNDM4_000837, complete
Gene Summary
Adenine Count
11103 bp
Thymine Count
11055 bp
Guanine Count
11694 bp
Cytosine Count
11632 bp
Genome Length
45484 bp
Protein-coding Genes
32 genes
Non-Coding Genes
22 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| two-component system sensor histidine kinase rcsc | D9N32_RS07715 | Not Available | Negative | 1139897 - 1142746 | 106499.0 |
| two-component system sensor histidine kinase atos | D9N32_RS07720 | Not Available | Positive | 1142913 - 1144739 | 67807.1 |
| acetoacetate metabolism transcriptional regulator atoc | D9N32_RS07725 | Not Available | Positive | 1144736 - 1146121 | 52151.5 |
| acetate coa-transferase subunit alpha | D9N32_RS07730 | Not Available | Positive | 1146317 - 1146979 | 23539.8 |
| acetate coa-transferase subunit beta | D9N32_RS07735 | Not Available | Positive | 1146979 - 1147629 | 22908.0 |
| tigr00366 family protein | D9N32_RS07740 | Not Available | Positive | 1147626 - 1148948 | 47530.6 |
| acetyl-coa acetyltransferase | D9N32_RS07745 | Not Available | Positive | 1148979 - 1150163 | 40357.1 |
| yfap family protein | D9N32_RS07750 | Not Available | Negative | 1150237 - 1151013 | 28232.2 |
| yfaq family protein | D9N32_RS07755 | Not Available | Negative | 1151018 - 1152667 | 61573.5 |
| alpha-2-macroglobulin family protein | D9N32_RS07760 | Not Available | Negative | 1152668 - 1157182 | 166812.0 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





