Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain WCHEC000837 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Genome Summary
Escherichia coli strain WCHEC000837 plasmid pNDM4_000837, complete
Gene Summary
Adenine Count
11103 bp
Thymine Count
11055 bp
Guanine Count
11694 bp
Cytosine Count
11632 bp
Genome Length
45484 bp
Protein-coding Genes
32 genes
Non-Coding Genes
22 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| multidrug resistance outer membrane protein mdtq | D9N32_RS07300 | Not Available | Negative | 1052372 - 1053808 | 52212.0 |
| small membrane protein yohp | D9N32_RS07305 | Not Available | Positive | 1054032 - 1054115 | 3092.28 |
| trna dihydrouridine(16) synthase dusc | D9N32_RS07310 | Not Available | Negative | 1054488 - 1055435 | 35255.6 |
| cida/lrga family protein | D9N32_RS07315 | Not Available | Positive | 1055674 - 1056072 | 14579.6 |
| cidb/lrgb family autolysis modulator | D9N32_RS07320 | Not Available | Positive | 1056069 - 1056764 | 24471.1 |
| cytidine deaminase | D9N32_RS07325 | Not Available | Positive | 1056894 - 1057778 | 31568.6 |
| outer membrane permeability protein sana | D9N32_RS07330 | Not Available | Positive | 1057928 - 1058647 | 27288.5 |
| duf2542 family protein | D9N32_RS07335 | Not Available | Positive | 1058650 - 1058889 | 9273.62 |
| nad-dependent dihydropyrimidine dehydrogenase subunit pret | D9N32_RS07340 | Not Available | Positive | 1059208 - 1060446 | 44285.0 |
| nad-dependent dihydropyrimidine dehydrogenase subunit prea | D9N32_RS07345 | Not Available | Positive | 1060440 - 1061675 | 45024.3 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





