Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain WCHEC000837 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Genome Summary
Escherichia coli strain WCHEC000837 plasmid pNDM4_000837, complete
Gene Summary
Adenine Count
11103 bp
Thymine Count
11055 bp
Guanine Count
11694 bp
Cytosine Count
11632 bp
Genome Length
45484 bp
Protein-coding Genes
32 genes
Non-Coding Genes
22 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nucleoside permease | D9N32_RS07100 | Not Available | Positive | 1003408 - 1004685 | 47337.8 |
| adp-ribosylglycohydrolase family protein | D9N32_RS07105 | Not Available | Positive | 1004682 - 1005686 | 35663.6 |
| carbohydrate kinase family protein | D9N32_RS07110 | Not Available | Positive | 1005683 - 1006648 | 34382.5 |
| gntr family transcriptional regulator | D9N32_RS07115 | Not Available | Negative | 1006622 - 1007368 | 28277.8 |
| glycoside hydrolase family 25 protein | D9N32_RS07120 | Not Available | Negative | 1007420 - 1008238 | 31634.8 |
| bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase | D9N32_RS07125 | Not Available | Negative | 1008303 - 1009103 | 28635.2 |
| hydroxyethylthiazole kinase | D9N32_RS07130 | Not Available | Negative | 1009100 - 1009888 | 27368.8 |
| ni(ii)/co(ii)-binding transcriptional repressor rcnr | D9N32_RS07135 | Not Available | Negative | 1010111 - 1010383 | 10134.5 |
| nickel/cobalt efflux protein rcna | D9N32_RS07140 | Not Available | Positive | 1010504 - 1011328 | 30415.2 |
| ni(ii)/co(ii) efflux transporter accessory subunit rcnb | D9N32_RS07145 | Not Available | Positive | 1011547 - 1011885 | 12466.8 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





