Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain WCHEC000837 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Genome Summary
Escherichia coli strain WCHEC000837 plasmid pNDM4_000837, complete
Gene Summary
Adenine Count
11103 bp
Thymine Count
11055 bp
Guanine Count
11694 bp
Cytosine Count
11632 bp
Genome Length
45484 bp
Protein-coding Genes
32 genes
Non-Coding Genes
22 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna-3-methyladenine glycosylase 2 | D9N32_RS06740 | Not Available | Negative | 940036 - 940893 | 31639.3 |
| molecular chaperone | D9N32_RS06750 | Not Available | Positive | 941027 - 942379 | 49321.1 |
| protein kinase yegi | D9N32_RS06755 | Not Available | Negative | 942392 - 944332 | 71365.6 |
| yegj family protein | D9N32_RS06760 | Not Available | Positive | 944530 - 944991 | 17428.8 |
| protein-serine/threonine phosphatase pphc | D9N32_RS06765 | Not Available | Negative | 945056 - 945817 | 27384.7 |
| vwa domain-containing protein | D9N32_RS06770 | Not Available | Negative | 945814 - 946473 | 24133.8 |
| type i toxin-antitoxin system toxin ibsa | D9N32_RS06775 | Not Available | Negative | 946694 - 946753 | 2232.03 |
| type i toxin-antitoxin system ibs family toxin | D9N32_RS06780 | Not Available | Negative | 947026 - 947082 | 2063.86 |
| type i toxin-antitoxin system ibs family toxin | D9N32_RS06785 | Not Available | Negative | 947354 - 947410 | 2152.9 |
| multidrug efflux rnd transporter subunit mdta | D9N32_RS06790 | Not Available | Positive | 947689 - 948936 | 44528.9 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





