Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain WCHEC000837 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Genome Summary
Escherichia coli strain WCHEC000837 plasmid pNDM4_000837, complete
Gene Summary
Adenine Count
11103 bp
Thymine Count
11055 bp
Guanine Count
11694 bp
Cytosine Count
11632 bp
Genome Length
45484 bp
Protein-coding Genes
32 genes
Non-Coding Genes
22 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| trimethylamine n-oxide reductase torz | D9N32_RS05475 | Not Available | Negative | 707409 - 709838 | 88908.8 |
| napc/nirt family cytochrome c | D9N32_RS05480 | Not Available | Negative | 709863 - 710963 | 40302.6 |
| copper homeostasis protein cutc | D9N32_RS05485 | Not Available | Negative | 711349 - 712095 | 26646.3 |
| voc family protein | D9N32_RS05490 | Not Available | Negative | 712109 - 712675 | 21223.1 |
| arginine--trna ligase | D9N32_RS05500 | Not Available | Positive | 712891 - 714624 | 64686.7 |
| flagellar protein flhe | D9N32_RS05505 | Not Available | Negative | 714677 - 715069 | 14140.4 |
| flagellar biosynthesis protein flha | D9N32_RS05510 | Not Available | Negative | 715069 - 717147 | 74837.6 |
| flagellar biosynthesis protein flhb | D9N32_RS05515 | Not Available | Negative | 717140 - 718288 | 42256.5 |
| protein phosphatase chez | D9N32_RS05520 | Not Available | Negative | 718490 - 719134 | 23977.4 |
| chemotaxis response regulator chey | D9N32_RS05525 | Not Available | Negative | 719145 - 719534 | 14098.2 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





