Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain WCHEC000837 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Genome Summary
Escherichia coli strain WCHEC000837 plasmid pNDM4_000837, complete
Gene Summary
Adenine Count
11103 bp
Thymine Count
11055 bp
Guanine Count
11694 bp
Cytosine Count
11632 bp
Genome Length
45484 bp
Protein-coding Genes
32 genes
Non-Coding Genes
22 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna-binding transcriptional regulator hexr | D9N32_RS05375 | Not Available | Positive | 689610 - 690479 | 31959.3 |
| pyruvate kinase | D9N32_RS05380 | Not Available | Positive | 690607 - 692049 | 51360.3 |
| lauroyl-kdo(2)-lipid iv(a) myristoyltransferase | D9N32_RS05385 | Not Available | Negative | 692181 - 693152 | 37412.5 |
| murein dd-endopeptidase mepm | D9N32_RS05390 | Not Available | Negative | 693271 - 694593 | 49060.6 |
| zinc abc transporter substrate-binding protein znua | D9N32_RS05395 | Not Available | Negative | 694609 - 695541 | 33904.4 |
| zinc abc transporter atp-binding protein znuc | D9N32_RS05400 | Not Available | Positive | 695620 - 696375 | 27927.3 |
| zinc abc transporter permease subunit znub | D9N32_RS05405 | Not Available | Positive | 696372 - 697157 | 27792.5 |
| holliday junction branch migration dna helicase ruvb | D9N32_RS05410 | Not Available | Negative | 697307 - 698317 | 37174.1 |
| holliday junction branch migration protein ruva | D9N32_RS05415 | Not Available | Negative | 698326 - 698937 | 22087.0 |
| stress response small protein yobi | D9N32_RS05420 | Not Available | Negative | 699076 - 699141 | 2639.39 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





