Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain WCHEC000837 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Genome Summary
Escherichia coli strain WCHEC000837 plasmid pNDM4_000837, complete
Gene Summary
Adenine Count
11103 bp
Thymine Count
11055 bp
Guanine Count
11694 bp
Cytosine Count
11632 bp
Genome Length
45484 bp
Protein-coding Genes
32 genes
Non-Coding Genes
22 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf2627 domain-containing protein | D9N32_RS05225 | Not Available | Negative | 660407 - 660550 | 5212.44 |
| yebo family protein | D9N32_RS05230 | Not Available | Negative | 661220 - 661507 | 10793.1 |
| phop/phoq regulator mgrb | D9N32_RS05235 | Not Available | Negative | 661582 - 661725 | 5552.09 |
| yobh family protein | D9N32_RS05240 | Not Available | Positive | 661884 - 662123 | 8514.67 |
| dna-binding transcriptional regulator kdgr | D9N32_RS05245 | Not Available | Negative | 662267 - 663058 | 30047.1 |
| mfs transporter | D9N32_RS05250 | Not Available | Positive | 663235 - 664608 | 48154.8 |
| protease htpx | D9N32_RS05255 | Not Available | Negative | 664654 - 665535 | 31971.4 |
| carboxy terminal-processing peptidase | D9N32_RS05260 | Not Available | Negative | 665727 - 667775 | 76581.2 |
| rna chaperone proq | D9N32_RS05265 | Not Available | Negative | 667795 - 668493 | 25863.9 |
| l-methionine (r)-s-oxide reductase | D9N32_RS05270 | Not Available | Negative | 668590 - 669087 | 18080.5 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





