Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain WCHEC000837 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Genome Summary
Escherichia coli strain WCHEC000837 plasmid pNDM4_000837, complete
Gene Summary
Adenine Count
11103 bp
Thymine Count
11055 bp
Guanine Count
11694 bp
Cytosine Count
11632 bp
Genome Length
45484 bp
Protein-coding Genes
32 genes
Non-Coding Genes
22 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| yeac family protein | D9N32_RS04970 | Not Available | Negative | 614441 - 614713 | 10273.4 |
| peptide-methionine (r)-s-oxide reductase msrb | D9N32_RS04975 | Not Available | Negative | 614755 - 615168 | 15452.0 |
| glyceraldehyde-3-phosphate dehydrogenase | D9N32_RS04980 | Not Available | Positive | 615510 - 616505 | 35534.5 |
| d-hexose-6-phosphate mutarotase | D9N32_RS04985 | Not Available | Positive | 616589 - 617473 | 32687.8 |
| methylglyoxal reductase yeae | D9N32_RS04990 | Not Available | Negative | 617524 - 618378 | 31057.6 |
| scaffolding protein mipa | D9N32_RS04995 | Not Available | Negative | 618468 - 619214 | 27832.4 |
| protein kinase yeag | D9N32_RS05000 | Not Available | Positive | 619651 - 621585 | 74484.3 |
| yeah/yhbh family protein | D9N32_RS05005 | Not Available | Positive | 621698 - 622981 | 49453.2 |
| ggdef domain-containing protein | D9N32_RS05010 | Not Available | Positive | 623128 - 624603 | 56042.6 |
| diguanylate cyclase dgcj | D9N32_RS05015 | Not Available | Positive | 624784 - 626274 | 56633.8 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





