Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain WCHEC000837 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Genome Summary
Escherichia coli strain WCHEC000837 plasmid pNDM4_000837, complete
Gene Summary
Adenine Count
11103 bp
Thymine Count
11055 bp
Guanine Count
11694 bp
Cytosine Count
11632 bp
Genome Length
45484 bp
Protein-coding Genes
32 genes
Non-Coding Genes
22 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| succinylglutamate-semialdehyde dehydrogenase | D9N32_RS04805 | Not Available | Negative | 582210 - 583688 | 52989.3 |
| arginine n-succinyltransferase | D9N32_RS04810 | Not Available | Negative | 583685 - 584719 | 38456.0 |
| succinylornithine/acetylornithine transaminase | D9N32_RS04815 | Not Available | Negative | 584716 - 585936 | 43611.7 |
| exodeoxyribonuclease iii | D9N32_RS04825 | Not Available | Positive | 586382 - 587188 | 30937.9 |
| tvp38/tmem64 family protein | D9N32_RS04830 | Not Available | Positive | 587355 - 588065 | 26144.9 |
| lipoprotein ydjy | D9N32_RS04835 | Not Available | Positive | 588070 - 588747 | 24258.8 |
| tvp38/tmem64 family protein | D9N32_RS04840 | Not Available | Positive | 588762 - 589469 | 26143.8 |
| carboxymuconolactone decarboxylase family protein | D9N32_RS04845 | Not Available | Positive | 589469 - 590017 | 20520.1 |
| abc transporter substrate-binding protein | D9N32_RS04850 | Not Available | Positive | 590027 - 591193 | 42795.7 |
| abc transporter permease | D9N32_RS04855 | Not Available | Positive | 591166 - 592701 | 56227.1 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





