Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain WCHEC000837 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Genome Summary
Escherichia coli strain WCHEC000837 plasmid pNDM4_000837, complete
Gene Summary
Adenine Count
11103 bp
Thymine Count
11055 bp
Guanine Count
11694 bp
Cytosine Count
11632 bp
Genome Length
45484 bp
Protein-coding Genes
32 genes
Non-Coding Genes
22 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 50s ribosomal protein l20 | D9N32_RS04650 | Not Available | Negative | 553556 - 553912 | 13497.7 |
| 50s ribosomal protein l35 | D9N32_RS04655 | Not Available | Negative | 553966 - 554163 | 7289.38 |
| translation initiation factor if-3 | D9N32_RS04660 | Not Available | Negative | 554260 - 554802 | 20565.2 |
| threonine--trna ligase | D9N32_RS04665 | Not Available | Negative | 554806 - 556734 | 74018.4 |
| type iii secretion system effector espl1 | D9N32_RS04670 | Not Available | Positive | 557257 - 559155 | 70940.3 |
| small membrane protein ynid | D9N32_RS04675 | Not Available | Positive | 559322 - 559429 | 4115.44 |
| ydiy family protein | D9N32_RS04680 | Not Available | Negative | 559482 - 560240 | 27599.6 |
| 6-phosphofructokinase ii | D9N32_RS04685 | Not Available | Positive | 560527 - 561456 | 32430.9 |
| type v toxin-antitoxin system endoribonuclease antitoxin ghos | D9N32_RS04690 | Not Available | Positive | 561557 - 561847 | 10821.5 |
| fructosamine kinase family protein | D9N32_RS04695 | Not Available | Positive | 561953 - 562813 | 32495.4 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





