Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain WCHEC000837 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Genome Summary
Escherichia coli strain WCHEC000837 plasmid pNDM4_000837, complete
Gene Summary
Adenine Count
11103 bp
Thymine Count
11055 bp
Guanine Count
11694 bp
Cytosine Count
11632 bp
Genome Length
45484 bp
Protein-coding Genes
32 genes
Non-Coding Genes
22 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lysr family transcriptional regulator | D9N32_RS03340 | Not Available | Positive | 306761 - 307660 | 33868.1 |
| tail fiber assembly protein | D9N32_RS03345 | Not Available | Positive | 308027 - 309059 | 35396.7 |
| sir2 family nad-dependent protein deacylase | D9N32_RS03350 | Not Available | Positive | 309274 - 310626 | 51557.4 |
| hipa n-terminal domain-containing protein | D9N32_RS03355 | Not Available | Negative | 310826 - 311521 | 25775.2 |
| type ii toxin-antitoxin system antitoxin hipb | D9N32_RS03360 | Not Available | Negative | 311521 - 311787 | 10047.9 |
| ecse_1600 family autotransporter | D9N32_RS03365 | Not Available | Negative | 311971 - 317391 | 188855.0 |
| tail fiber assembly protein | D9N32_RS03370 | Not Available | Negative | 317915 - 319201 | 46328.5 |
| tail fiber assembly protein | D9N32_RS03375 | Not Available | Positive | 319203 - 320000 | 28110.5 |
| autoinducer 2 abc transporter permease lsrd | D9N32_RS03380 | Not Available | Positive | 320000 - 320992 | 34458.6 |
| autoinducer 2 abc transporter substrate-binding protein lsrb | D9N32_RS03385 | Not Available | Positive | 321004 - 322026 | 36777.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





