Tenacibaculum singaporense strain DSM 106434

rodaerobic

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Flavobacteriia

Order

Flavobacteriales

Family

Flavobacteriaceae

Genus

Tenacibaculum

Description

Tenacibaculum singaporense strain DSM 106434 is a Gram-negative, aerobic bacterium characterized by its rod-shaped morphology and motility. This strain thrives at an optimal temperature of 37°C, placing it within the mesophilic temperature range, which is typically between 20°C to 45°C. Tenacibaculum singaporense has a single replicon, which is relevant for understanding its genetic stability and replication processes. The strain is cataloged under the accession number NZ_CP032548.1, indicating its availability for further research and characterization within microbial databases. The ecological significance of Tenacibaculum singaporense may relate to its habitat and role in marine ecosystems, as the genus Tenacibaculum is often found in aquatic environments. This suggests potential interactions with marine organisms, possibly influencing the health of marine ecosystems or contributing to the microbial diversity in these habitats. Further studies would be necessary to elucidate its specific ecological roles and interactions within such environments.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassFlavobacteriia
OrderFlavobacteriales
FamilyFlavobacteriaceae
GenusTenacibaculum
SpeciesTenacibaculum singaporense
Strainstrain DSM 106434

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
Mobilitymotile
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperature37
Temperature rangemesophilic
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Tenacibaculum singaporense strain DSM 106434 chromosome.

Gene Summary

Adenine Count

1189453 bp

Thymine Count

1198306 bp

Guanine Count

561058 bp

Cytosine Count

562887 bp

Genome Length

3511804 bp

Protein-coding Genes

3139 genes

Non-Coding Genes

69 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
3-isopropylmalate dehydrogenaseD6T69_RS11190Not AvailableNegative2540338 - 254145340844.0
3-isopropylmalate dehydratase small subunitD6T69_RS11195Not AvailableNegative2541465 - 254204621545.8
3-isopropylmalate dehydratase large subunitD6T69_RS11200Not AvailableNegative2542046 - 254342850802.7
2-isopropylmalate synthaseD6T69_RS11205Not AvailableNegative2543428 - 254460342841.4
hypothetical proteinD6T69_RS11210Not AvailablePositive2544736 - 254630161742.8
nad(p)h-dependent flavin oxidoreductaseD6T69_RS11215Not AvailableNegative2546732 - 254767033894.4
toxin-antitoxin system ywqk family antitoxinD6T69_RS11220Not AvailableNegative2547764 - 254857331386.4
trna 2-thiouridine(34) synthase mnmaD6T69_RS11225Not AvailableNegative2548594 - 254978145033.5
toxin-antitoxin system ywqk family antitoxinD6T69_RS11230Not AvailableNegative2549934 - 255064127232.4
adenylosuccinate lyaseD6T69_RS11235Not AvailablePositive2550687 - 255127722454.5

Displaying genes 2261 – 2270 of 3208 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.