Tenacibaculum singaporense strain DSM 106434

rodaerobic

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Flavobacteriia

Order

Flavobacteriales

Family

Flavobacteriaceae

Genus

Tenacibaculum

Description

Tenacibaculum singaporense strain DSM 106434 is a Gram-negative, aerobic bacterium characterized by its rod-shaped morphology and motility. This strain thrives at an optimal temperature of 37°C, placing it within the mesophilic temperature range, which is typically between 20°C to 45°C. Tenacibaculum singaporense has a single replicon, which is relevant for understanding its genetic stability and replication processes. The strain is cataloged under the accession number NZ_CP032548.1, indicating its availability for further research and characterization within microbial databases. The ecological significance of Tenacibaculum singaporense may relate to its habitat and role in marine ecosystems, as the genus Tenacibaculum is often found in aquatic environments. This suggests potential interactions with marine organisms, possibly influencing the health of marine ecosystems or contributing to the microbial diversity in these habitats. Further studies would be necessary to elucidate its specific ecological roles and interactions within such environments.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassFlavobacteriia
OrderFlavobacteriales
FamilyFlavobacteriaceae
GenusTenacibaculum
SpeciesTenacibaculum singaporense
Strainstrain DSM 106434

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
Mobilitymotile
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperature37
Temperature rangemesophilic
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Tenacibaculum singaporense strain DSM 106434 chromosome.

Gene Summary

Adenine Count

1189453 bp

Thymine Count

1198306 bp

Guanine Count

561058 bp

Cytosine Count

562887 bp

Genome Length

3511804 bp

Protein-coding Genes

3139 genes

Non-Coding Genes

69 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
cytidine deaminaseD6T69_RS05760Not AvailableNegative1263217 - 126369917397.8
type ix secretion system outer membrane channel protein porvD6T69_RS05765Not AvailableNegative1263782 - 126487640324.4
gliding motility lipoprotein gldjD6T69_RS05770Not AvailablePositive1265252 - 126695264617.2
udp-n-acetylmuramoyl-tripeptide--d-alanyl-d- alanine ligaseD6T69_RS05775Not AvailablePositive1267017 - 126827046639.4
n-acetylglucosamine kinaseD6T69_RS05780Not AvailableNegative1268267 - 126911831959.6
tyrosine-protein phosphataseD6T69_RS05785Not AvailablePositive1269265 - 127000228455.4
gumc family proteinD6T69_RS05790Not AvailableNegative1270051 - 127242388902.9
polysaccharide biosynthesis/export family proteinD6T69_RS05795Not AvailableNegative1272431 - 127319828312.3
polysaccharide biosynthesis proteinD6T69_RS05800Not AvailableNegative1273227 - 127513171765.9
duf2892 domain-containing proteinD6T69_RS05805Not AvailableNegative1275191 - 127570619706.9

Displaying genes 1161 – 1170 of 3208 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.