Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain AR_0067 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Genome Summary
Escherichia coli strain AR_0067 chromosome, complete genome.
Gene Summary
Adenine Count
1257791 bp
Thymine Count
1263606 bp
Guanine Count
1302961 bp
Cytosine Count
1295195 bp
Genome Length
5119553 bp
Protein-coding Genes
4512 genes
Non-Coding Genes
475 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| d-xylose abc transporter substrate-binding protein | AM446_RS02215 | Not Available | Negative | 88518 - 89510 | 35796.2 |
| xylose isomerase | AM446_RS02220 | Not Available | Positive | 89876 - 91198 | 49702.6 |
| xylulokinase | AM446_RS02225 | Not Available | Positive | 91270 - 92724 | 52668.4 |
| inner membrane protein yiab | AM446_RS02230 | Not Available | Positive | 92892 - 93233 | 12550.0 |
| inner membrane protein yiaa | AM446_RS02235 | Not Available | Positive | 93279 - 93716 | 16137.7 |
| o-acetyltransferase wech | AM446_RS02240 | Not Available | Negative | 93758 - 94753 | 37620.1 |
| ysab family lipoprotein | AM446_RS02245 | Not Available | Positive | 94928 - 95236 | 11594.2 |
| glycine--trna ligase subunit alpha | AM446_RS02250 | Not Available | Positive | 95331 - 96242 | 34718.2 |
| glycine--trna ligase subunit beta | AM446_RS02255 | Not Available | Positive | 96252 - 98321 | 76799.2 |
| type i toxin-antitoxin system toxin hoka | AM446_RS02260 | Not Available | Positive | 98644 - 98796 | 5868.43 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





