Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain AR_0067 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Genome Summary
Escherichia coli strain AR_0067 chromosome, complete genome.
Gene Summary
Adenine Count
1257791 bp
Thymine Count
1263606 bp
Guanine Count
1302961 bp
Cytosine Count
1295195 bp
Genome Length
5119553 bp
Protein-coding Genes
4512 genes
Non-Coding Genes
475 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sagb/thcox family dehydrogenase | AM446_RS28285 | Not Available | Negative | 57275 - 58093 | 30754.8 |
| mcbb family protein | AM446_RS28290 | Not Available | Negative | 58095 - 58949 | 32745.6 |
| microcin b17 family tomm | AM446_RS28295 | Not Available | Negative | 59009 - 59218 | 6013.01 |
| acyltransferase | AM446_RS28300 | Not Available | Positive | 59748 - 60200 | 16090.5 |
| plasmid partitioning/stability family protein | AM446_RS28310 | Not Available | Negative | 60603 - 60953 | 13103.7 |
| plasmid segregation protein parm | AM446_RS28315 | Not Available | Negative | 60956 - 61918 | 35767.5 |
| hypothetical protein | AM446_RS28320 | Not Available | Positive | 62066 - 62284 | 8295.02 |
| is110-like element isshdy1 family transposase | AM446_RS28325 | Not Available | Positive | 62388 - 63404 | 36979.4 |
| hypothetical protein | AM446_RS29260 | Not Available | Positive | 63951 - 64025 | 2847.55 |
| duf1281 domain-containing protein | AM446_RS28335 | Not Available | Positive | 64120 - 65022 | 34020.7 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





