Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain AR_0067 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Genome Summary
Escherichia coli strain AR_0067 chromosome, complete genome.
Gene Summary
Adenine Count
1257791 bp
Thymine Count
1263606 bp
Guanine Count
1302961 bp
Cytosine Count
1295195 bp
Genome Length
5119553 bp
Protein-coding Genes
4512 genes
Non-Coding Genes
475 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| p-type conjugative transfer protein trbj | AM446_RS28115 | Not Available | Positive | 25542 - 25889 | 12944.0 |
| f-type conjugal transfer protein trbf | AM446_RS28120 | Not Available | Positive | 25870 - 26262 | 15684.0 |
| conjugal transfer pilus assembly protein trah | AM446_RS28125 | Not Available | Positive | 26249 - 27622 | 50298.4 |
| conjugal transfer mating-pair stabilization protein trag | AM446_RS28130 | Not Available | Positive | 27619 - 30444 | 103076.0 |
| conjugal transfer entry exclusion protein tras | AM446_RS28135 | Not Available | Positive | 30441 - 30950 | 19435.7 |
| conjugal transfer complement resistance protein trat | AM446_RS28140 | Not Available | Positive | 30964 - 31695 | 25902.2 |
| hypothetical protein | AM446_RS28145 | Not Available | Positive | 31898 - 32635 | 27487.7 |
| type iv conjugative transfer system coupling protein trad | AM446_RS28150 | Not Available | Positive | 32686 - 34893 | 83483.7 |
| conjugative transfer relaxase/helicase trai | AM446_RS28155 | Not Available | Positive | 34893 - 40163 | 191851.0 |
| conjugal transfer pilus acetylase trax | AM446_RS28160 | Not Available | Positive | 40183 - 40929 | 27356.6 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





