Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain AR_0067 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Genome Summary
Escherichia coli strain AR_0067 chromosome, complete genome.
Gene Summary
Adenine Count
1257791 bp
Thymine Count
1263606 bp
Guanine Count
1302961 bp
Cytosine Count
1295195 bp
Genome Length
5119553 bp
Protein-coding Genes
4512 genes
Non-Coding Genes
475 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type-f conjugative transfer system protein traw | AM446_RS28065 | Not Available | Positive | 18849 - 19481 | 23631.7 |
| conjugal transfer pilus assembly protein trau | AM446_RS28070 | Not Available | Positive | 19478 - 20470 | 36683.5 |
| hypothetical protein | AM446_RS28075 | Not Available | Positive | 20500 - 20805 | 11828.9 |
| type-f conjugative transfer system pilin assembly protein trbc | AM446_RS28080 | Not Available | Positive | 20814 - 21452 | 23524.1 |
| type-f conjugative transfer system mating-pair stabilization protein tran | AM446_RS28085 | Not Available | Positive | 21449 - 23299 | 66781.2 |
| conjugal transfer protein trbe | AM446_RS28090 | Not Available | Positive | 23326 - 23583 | 9847.01 |
| type-f conjugative transfer system pilin assembly protein traf | AM446_RS28095 | Not Available | Positive | 23576 - 24319 | 27976.6 |
| conjugal transfer protein trba | AM446_RS28100 | Not Available | Positive | 24333 - 24677 | 12570.8 |
| type-f conjugative transfer system pilin chaperone traq | AM446_RS28105 | Not Available | Positive | 24796 - 25080 | 10830.3 |
| type-f conjugative transfer system pilin assembly thiol-disulfide isomerase trbb | AM446_RS28110 | Not Available | Positive | 25067 - 25612 | 20061.3 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





