Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain AR_0067 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Genome Summary
Escherichia coli strain AR_0067 chromosome, complete genome.
Gene Summary
Adenine Count
1257791 bp
Thymine Count
1263606 bp
Guanine Count
1302961 bp
Cytosine Count
1295195 bp
Genome Length
5119553 bp
Protein-coding Genes
4512 genes
Non-Coding Genes
475 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type 4b pilus protein pilo2 | AM446_RS01445 | Not Available | Negative | 40970 - 42265 | 47989.1 |
| piln family type ivb pilus formation outer membrane protein | AM446_RS01450 | Not Available | Negative | 42286 - 43905 | 57537.6 |
| type iv pilus biogenesis protein pilm | AM446_RS01455 | Not Available | Negative | 43937 - 44374 | 16308.8 |
| toxin co-regulated pilus biosynthesis q family protein | AM446_RS01460 | Not Available | Negative | 44378 - 45448 | 38721.5 |
| hypothetical protein | AM446_RS01465 | Not Available | Negative | 45675 - 46010 | 12547.9 |
| type iv pilus biogenesis protein pili | AM446_RS01470 | Not Available | Negative | 46126 - 46368 | 9157.18 |
| flotillin family protein | AM446_RS01475 | Not Available | Negative | 46449 - 48128 | 61185.7 |
| broad-spectrum class a beta-lactamase tem-1 | AM446_RS01480 | Not Available | Negative | 48260 - 49120 | 31517.0 |
| recombinase family protein | AM446_RS01485 | Not Available | Negative | 49303 - 49860 | 20604.8 |
| tn3-like element tn3 family transposase | AM446_RS01490 | Not Available | Positive | 50024 - 53029 | 113130.0 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





