Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain AR_0067 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Genome Summary
Escherichia coli strain AR_0067 chromosome, complete genome.
Gene Summary
Adenine Count
1257791 bp
Thymine Count
1263606 bp
Guanine Count
1302961 bp
Cytosine Count
1295195 bp
Genome Length
5119553 bp
Protein-coding Genes
4512 genes
Non-Coding Genes
475 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| conjugal transfer protein traf | AM446_RS01395 | Not Available | Negative | 32067 - 33269 | 42790.0 |
| hypothetical protein | AM446_RS01400 | Not Available | Negative | 33371 - 34192 | 31184.1 |
| hypothetical protein | AM446_RS29030 | Not Available | Negative | 34357 - 34551 | 7324.86 |
| shufflon system plasmid conjugative transfer pilus tip adhesin pilv | AM446_RS01410 | Not Available | Negative | 34665 - 36026 | 48894.8 |
| prepilin peptidase | AM446_RS01415 | Not Available | Negative | 36044 - 36670 | 23211.1 |
| lytic transglycosylase domain-containing protein | AM446_RS01420 | Not Available | Negative | 36686 - 37171 | 18413.4 |
| type 4 pilus major pilin | AM446_RS01425 | Not Available | Negative | 37216 - 37752 | 19085.9 |
| type ii secretion system f family protein | AM446_RS01430 | Not Available | Negative | 37814 - 38908 | 41099.8 |
| gspe/pule family protein | AM446_RS01435 | Not Available | Negative | 38910 - 40418 | 55972.2 |
| type iv pilus biogenesis protein pilp | AM446_RS01440 | Not Available | Negative | 40522 - 40980 | 16572.8 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





