Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain AR_0067 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Genome Summary
Escherichia coli strain AR_0067 chromosome, complete genome.
Gene Summary
Adenine Count
1257791 bp
Thymine Count
1263606 bp
Guanine Count
1302961 bp
Cytosine Count
1295195 bp
Genome Length
5119553 bp
Protein-coding Genes
4512 genes
Non-Coding Genes
475 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| conjugal transfer protein trap | AM446_RS01345 | Not Available | Negative | 21018 - 21731 | 26065.2 |
| conjugal transfer protein trao | AM446_RS01350 | Not Available | Negative | 21728 - 23065 | 47590.9 |
| doth/icmk family type iv secretion protein | AM446_RS01355 | Not Available | Negative | 23069 - 24043 | 34217.7 |
| doti/icml family type iv secretion protein | AM446_RS01360 | Not Available | Negative | 24054 - 24749 | 25445.3 |
| hypothetical protein | AM446_RS01365 | Not Available | Negative | 24761 - 25111 | 12594.0 |
| lpd7 domain-containing protein | AM446_RS01370 | Not Available | Negative | 25128 - 29189 | 147940.0 |
| icmt/trak family protein | AM446_RS01375 | Not Available | Negative | 29253 - 29543 | 11506.1 |
| plasmid transfer atpase traj | AM446_RS01380 | Not Available | Negative | 29540 - 30688 | 42487.9 |
| type iv secretory system conjugative dna transfer family protein | AM446_RS01385 | Not Available | Negative | 30672 - 31508 | 31622.8 |
| dotd/trah family lipoprotein | AM446_RS01390 | Not Available | Negative | 31505 - 31963 | 16650.9 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





