Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain AR_0067 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Genome Summary
Escherichia coli strain AR_0067 chromosome, complete genome.
Gene Summary
Adenine Count
1257791 bp
Thymine Count
1263606 bp
Guanine Count
1302961 bp
Cytosine Count
1295195 bp
Genome Length
5119553 bp
Protein-coding Genes
4512 genes
Non-Coding Genes
475 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| plasmid inci1-type surface exclusion protein exca | AM446_RS01290 | Not Available | Negative | 10336 - 10989 | 25286.9 |
| dota/tray family protein | AM446_RS01295 | Not Available | Negative | 11077 - 13242 | 77495.1 |
| conjugal transfer protein trax | AM446_RS01300 | Not Available | Negative | 13317 - 13886 | 22103.4 |
| conjugal transfer protein traw | AM446_RS01305 | Not Available | Negative | 13883 - 15088 | 42945.2 |
| hypothetical protein | AM446_RS01310 | Not Available | Negative | 15046 - 15666 | 23458.4 |
| conjugal transfer protein | AM446_RS01315 | Not Available | Negative | 15666 - 18710 | 114165.0 |
| hypothetical protein | AM446_RS01325 | Not Available | Negative | 19005 - 19823 | 31130.8 |
| hypothetical protein | AM446_RS29280 | Not Available | Negative | 19738 - 19989 | 9118.84 |
| duf6750 family protein | AM446_RS01335 | Not Available | Negative | 20046 - 20444 | 13733.8 |
| conjugal transfer protein traq | AM446_RS01340 | Not Available | Negative | 20491 - 21021 | 18217.5 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





