Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain AR_0067 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Genome Summary
Escherichia coli strain AR_0067 chromosome, complete genome.
Gene Summary
Adenine Count
1257791 bp
Thymine Count
1263606 bp
Guanine Count
1302961 bp
Cytosine Count
1295195 bp
Genome Length
5119553 bp
Protein-coding Genes
4512 genes
Non-Coding Genes
475 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transcriptional regulator uhpa | AM446_RS27680 | Not Available | Positive | 5055908 - 5056498 | 20890.6 |
| signal transduction histidine-protein kinase/phosphatase uhpb | AM446_RS27685 | Not Available | Positive | 5056498 - 5058000 | 56291.4 |
| mfs transporter family glucose-6-phosphate receptor uhpc | AM446_RS27690 | Not Available | Positive | 5058010 - 5059329 | 48217.3 |
| hexose-6-phosphate:phosphate antiporter | AM446_RS27695 | Not Available | Positive | 5059585 - 5060976 | 50609.6 |
| adenine deaminase | AM446_RS27700 | Not Available | Negative | 5061023 - 5062789 | 63690.1 |
| adenine permease adeq | AM446_RS27705 | Not Available | Positive | 5062964 - 5064298 | 46998.6 |
| duf1198 domain-containing protein | AM446_RS27710 | Not Available | Positive | 5064351 - 5064803 | 17220.1 |
| helix-turn-helix domain-containing protein | AM446_RS27715 | Not Available | Negative | 5064919 - 5065242 | 11639.2 |
| type ii toxin-antitoxin system rele/pare family toxin | AM446_RS27720 | Not Available | Negative | 5065226 - 5065579 | 13456.2 |
| purine ribonucleoside efflux pump nepi | AM446_RS27730 | Not Available | Positive | 5065813 - 5066997 | 41657.3 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





