Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain AR_0067 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Genome Summary
Escherichia coli strain AR_0067 chromosome, complete genome.
Gene Summary
Adenine Count
1257791 bp
Thymine Count
1263606 bp
Guanine Count
1302961 bp
Cytosine Count
1295195 bp
Genome Length
5119553 bp
Protein-coding Genes
4512 genes
Non-Coding Genes
475 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| bifunctional demethylmenaquinone methyltransferase/2-methoxy-6-polyprenyl-1,4-benzoquinol methylase ubie | AM446_RS26775 | Not Available | Negative | 4880185 - 4880940 | 28074.8 |
| dna recombination protein rmuc | AM446_RS26780 | Not Available | Negative | 4881035 - 4882462 | 54753.6 |
| uridine phosphorylase | AM446_RS26785 | Not Available | Negative | 4882603 - 4883364 | 27151.7 |
| dienelactone hydrolase family protein | AM446_RS26790 | Not Available | Positive | 4883626 - 4884438 | 29397.7 |
| type vi secretion system tube protein tssd | AM446_RS26795 | Not Available | Positive | 4884830 - 4885963 | 42309.0 |
| hypothetical protein | AM446_RS26800 | Not Available | Positive | 4885960 - 4886217 | 9703.81 |
| hypothetical protein | AM446_RS29220 | Not Available | Positive | 4886292 - 4886537 | 9340.26 |
| 5-methyltetrahydropteroyltriglutamate-- homocysteine s-methyltransferase | AM446_RS26810 | Not Available | Negative | 4886706 - 4888967 | 84655.1 |
| hth-type transcriptional regulator metr | AM446_RS26815 | Not Available | Positive | 4889085 - 4890038 | 35645.1 |
| biotin transporter | AM446_RS26820 | Not Available | Negative | 4889926 - 4890825 | 33741.0 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





