Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain AR_0067 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Genome Summary
Escherichia coli strain AR_0067 chromosome, complete genome.
Gene Summary
Adenine Count
1257791 bp
Thymine Count
1263606 bp
Guanine Count
1302961 bp
Cytosine Count
1295195 bp
Genome Length
5119553 bp
Protein-coding Genes
4512 genes
Non-Coding Genes
475 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 23s ribosomal rna | Not Available | Not Available | Positive | 4713081 - 4715984 | Not Available |
| Trna-glu | Not Available | Not Available | Positive | 4716178 - 4716253 | Not Available |
| 16s ribosomal rna | Not Available | Not Available | Positive | 4716339 - 4717880 | Not Available |
| glutamate racemase | AM446_RS26020 | Not Available | Negative | 4718253 - 4719110 | 31146.9 |
| tonb-dependent vitamin b12 receptor btub | AM446_RS26025 | Not Available | Negative | 4719055 - 4720899 | 68435.8 |
| trna (uridine(54)-c5)-methyltransferase trma | AM446_RS26030 | Not Available | Positive | 4721268 - 4722368 | 41939.3 |
| yijd family membrane protein | AM446_RS26035 | Not Available | Negative | 4722408 - 4722767 | 13024.3 |
| hth-type transcriptional repressor fabr | AM446_RS26040 | Not Available | Negative | 4722767 - 4723417 | 24536.5 |
| si-specific nad(p)(+) transhydrogenase | AM446_RS26045 | Not Available | Positive | 4723749 - 4725149 | 51563.4 |
| dna-binding transcriptional regulator oxyr | AM446_RS26050 | Not Available | Negative | 4725132 - 4726049 | 34278.1 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





