Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain AR_0067 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Genome Summary
Escherichia coli strain AR_0067 chromosome, complete genome.
Gene Summary
Adenine Count
1257791 bp
Thymine Count
1263606 bp
Guanine Count
1302961 bp
Cytosine Count
1295195 bp
Genome Length
5119553 bp
Protein-coding Genes
4512 genes
Non-Coding Genes
475 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 5s ribosomal rna | Not Available | Not Available | Positive | 4671485 - 4671600 | Not Available |
| 23s ribosomal rna | Not Available | Not Available | Positive | 4671695 - 4674598 | Not Available |
| Trna-glu | Not Available | Not Available | Positive | 4674792 - 4674867 | Not Available |
| 16s ribosomal rna | Not Available | Not Available | Positive | 4674953 - 4676494 | Not Available |
| bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/imp cyclohydrolase | AM446_RS25810 | Not Available | Positive | 4677112 - 4678701 | 57357.4 |
| phosphoribosylamine--glycine ligase | AM446_RS25815 | Not Available | Positive | 4678713 - 4680002 | 45971.0 |
| sigma-54-dependent response regulator transcription factor zrar | AM446_RS25820 | Not Available | Negative | 4679999 - 4681324 | 48329.4 |
| two-component system sensor histidine kinase zras | AM446_RS25825 | Not Available | Negative | 4681321 - 4682718 | 51164.1 |
| zinc resistance sensor/chaperone zrap | AM446_RS25830 | Not Available | Positive | 4682956 - 4683381 | 15231.3 |
| duf1481 domain-containing protein | AM446_RS25835 | Not Available | Negative | 4683383 - 4684078 | 26352.9 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





