Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain AR_0067 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Genome Summary
Escherichia coli strain AR_0067 chromosome, complete genome.
Gene Summary
Adenine Count
1257791 bp
Thymine Count
1263606 bp
Guanine Count
1302961 bp
Cytosine Count
1295195 bp
Genome Length
5119553 bp
Protein-coding Genes
4512 genes
Non-Coding Genes
475 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| is3-like element is1397 family transposase | AM446_RS25735 | Not Available | Negative | 4654220 - 4655568 | 51781.4 |
| na/pi cotransporter family protein | AM446_RS25740 | Not Available | Negative | 4655654 - 4657285 | 59470.7 |
| methionine synthase | AM446_RS25745 | Not Available | Negative | 4657505 - 4661188 | 136034.0 |
| glyoxylate bypass operon transcriptional repressor iclr | AM446_RS25750 | Not Available | Positive | 4661388 - 4662212 | 29741.1 |
| type iii secretion system effector espl4 | AM446_RS25755 | Not Available | Positive | 4662529 - 4664715 | 82820.4 |
| bifunctional isocitrate dehydrogenase kinase/phosphatase | AM446_RS25760 | Not Available | Negative | 4664684 - 4666420 | 67572.2 |
| isocitrate lyase | AM446_RS25765 | Not Available | Negative | 4666469 - 4667773 | 47524.1 |
| malate synthase a | AM446_RS25770 | Not Available | Negative | 4667803 - 4669404 | 60333.0 |
| homoserine o-acetyltransferase meta | AM446_RS25775 | Not Available | Negative | 4669673 - 4670602 | 35729.2 |
| acetyltransferase | AM446_RS25780 | Not Available | Positive | 4670759 - 4671202 | 16538.8 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





