Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain AR_0067 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Genome Summary
Escherichia coli strain AR_0067 chromosome, complete genome.
Gene Summary
Adenine Count
1257791 bp
Thymine Count
1263606 bp
Guanine Count
1302961 bp
Cytosine Count
1295195 bp
Genome Length
5119553 bp
Protein-coding Genes
4512 genes
Non-Coding Genes
475 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cytochrome c nitrite reductase subunit nrfd | AM446_RS25420 | Not Available | Negative | 4587959 - 4588915 | 35041.4 |
| cytochrome c nitrite reductase fe-s protein | AM446_RS25425 | Not Available | Negative | 4588912 - 4589583 | 24568.8 |
| cytochrome c nitrite reductase pentaheme subunit | AM446_RS25430 | Not Available | Negative | 4589580 - 4590146 | 20657.6 |
| ammonia-forming nitrite reductase cytochrome c552 subunit | AM446_RS25435 | Not Available | Negative | 4590191 - 4591627 | 53747.8 |
| acetate--coa ligase | AM446_RS25445 | Not Available | Positive | 4592020 - 4593978 | 72011.4 |
| duf485 domain-containing protein | AM446_RS25450 | Not Available | Positive | 4594204 - 4594518 | 11672.3 |
| cation/acetate symporter actp | AM446_RS25455 | Not Available | Positive | 4594515 - 4596164 | 59213.7 |
| t3ss effector pentapeptide repeat protein espx5 | AM446_RS25460 | Not Available | Positive | 4596342 - 4597634 | 49325.0 |
| na+/h+ antiporter | AM446_RS25465 | Not Available | Negative | 4597788 - 4599437 | 60527.5 |
| guanine/hypoxanthine transporter ghxp | AM446_RS25470 | Not Available | Negative | 4599588 - 4600937 | 45714.4 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





