Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain AR_0067 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Genome Summary
Escherichia coli strain AR_0067 chromosome, complete genome.
Gene Summary
Adenine Count
1257791 bp
Thymine Count
1263606 bp
Guanine Count
1302961 bp
Cytosine Count
1295195 bp
Genome Length
5119553 bp
Protein-coding Genes
4512 genes
Non-Coding Genes
475 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| alpha-d-ribose 1-methylphosphonate 5-phosphate c-p-lyase phnj | AM446_RS25315 | Not Available | Positive | 4567083 - 4567928 | 31833.9 |
| phosphonate c-p lyase system protein phnk | AM446_RS25320 | Not Available | Positive | 4567925 - 4568683 | 27853.6 |
| phosphonate c-p lyase system protein phnl | AM446_RS25325 | Not Available | Positive | 4568794 - 4569474 | 24759.0 |
| alpha-d-ribose 1-methylphosphonate 5-triphosphate diphosphatase | AM446_RS25330 | Not Available | Positive | 4569471 - 4570607 | 42065.9 |
| ribose 1,5-bisphosphokinase | AM446_RS25335 | Not Available | Positive | 4570607 - 4571173 | 20890.9 |
| aminoalkylphosphonate n-acetyltransferase | AM446_RS25340 | Not Available | Positive | 4571160 - 4571594 | 16584.8 |
| phosphonate metabolism protein phnp | AM446_RS25345 | Not Available | Positive | 4571596 - 4572354 | 27940.4 |
| ddrrrql repeat protein yjdp | AM446_RS25350 | Not Available | Negative | 4572389 - 4572718 | 13450.3 |
| rpib/laca/lacb family sugar-phosphate isomerase | AM446_RS25355 | Not Available | Negative | 4572787 - 4573104 | 11628.9 |
| alkyl sulfatase yjcs | AM446_RS25360 | Not Available | Positive | 4573357 - 4575342 | 73184.0 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





