Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain AR_0067 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Genome Summary
Escherichia coli strain AR_0067 chromosome, complete genome.
Gene Summary
Adenine Count
1257791 bp
Thymine Count
1263606 bp
Guanine Count
1302961 bp
Cytosine Count
1295195 bp
Genome Length
5119553 bp
Protein-coding Genes
4512 genes
Non-Coding Genes
475 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| clamp-binding protein crfc | AM446_RS25260 | Not Available | Negative | 4557811 - 4560039 | 84319.9 |
| zinc ribbon domain-containing protein yjdm | AM446_RS25270 | Not Available | Positive | 4560441 - 4560776 | 12345.7 |
| voc family metalloprotein yjdn | AM446_RS25275 | Not Available | Positive | 4560936 - 4561379 | 16172.2 |
| phosphonate abc transporter atp-binding protein | AM446_RS25280 | Not Available | Positive | 4561512 - 4562300 | 29457.4 |
| phosphonate abc transporter substrate-binding protein | AM446_RS25285 | Not Available | Positive | 4562325 - 4563341 | 37372.6 |
| phosphonate abc transporter, permease protein phne | AM446_RS25290 | Not Available | Positive | 4563467 - 4564246 | 28399.3 |
| phosphonate metabolism transcriptional regulator phnf | AM446_RS25295 | Not Available | Positive | 4564267 - 4564992 | 27593.0 |
| phosphonate c-p lyase system protein phng | AM446_RS25300 | Not Available | Positive | 4564993 - 4565445 | 16597.8 |
| phosphonate c-p lyase system protein phnh | AM446_RS25305 | Not Available | Positive | 4565442 - 4566026 | 20970.6 |
| alpha-d-ribose 1-methylphosphonate 5-triphosphate synthase subunit phni | AM446_RS25310 | Not Available | Positive | 4566026 - 4567090 | 38912.1 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





