Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain AR_0067 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Genome Summary
Escherichia coli strain AR_0067 chromosome, complete genome.
Gene Summary
Adenine Count
1257791 bp
Thymine Count
1263606 bp
Guanine Count
1302961 bp
Cytosine Count
1295195 bp
Genome Length
5119553 bp
Protein-coding Genes
4512 genes
Non-Coding Genes
475 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type v toxin-antitoxin system endoribonuclease antitoxin ghos | AM446_RS25150 | Not Available | Negative | 4534292 - 4534588 | 11468.6 |
| gnat family n-acetyltransferase | AM446_RS25155 | Not Available | Negative | 4534817 - 4535089 | 10469.6 |
| 4fe-4s mono-cluster protein yjdi | AM446_RS25160 | Not Available | Negative | 4535101 - 4535331 | 8578.41 |
| sensor histidine kinase | AM446_RS25165 | Not Available | Positive | 4535512 - 4537143 | 60554.4 |
| two-component system response regulator dcur | AM446_RS25170 | Not Available | Positive | 4537140 - 4537859 | 27489.9 |
| anaerobic c4-dicarboxylate transporter dcub | AM446_RS25180 | Not Available | Positive | 4538430 - 4539770 | 47938.2 |
| class i fumarate hydratase | AM446_RS25185 | Not Available | Positive | 4539848 - 4541494 | 60094.7 |
| duf2238 domain-containing protein | AM446_RS25190 | Not Available | Positive | 4541617 - 4542246 | 23339.3 |
| melibiose:sodium transporter melb | AM446_RS25200 | Not Available | Negative | 4542385 - 4543806 | 52627.5 |
| alpha-galactosidase | AM446_RS25205 | Not Available | Negative | 4543909 - 4545264 | 50672.9 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





