Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain AR_0067 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Genome Summary
Escherichia coli strain AR_0067 chromosome, complete genome.
Gene Summary
Adenine Count
1257791 bp
Thymine Count
1263606 bp
Guanine Count
1302961 bp
Cytosine Count
1295195 bp
Genome Length
5119553 bp
Protein-coding Genes
4512 genes
Non-Coding Genes
475 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ribosome biogenesis factor yjga | AM446_RS24570 | Not Available | Positive | 4427726 - 4428277 | 21360.5 |
| udp-n-acetylmuramate:l-alanyl-gamma-d-glutamyl- meso-diaminopimelate ligase | AM446_RS24575 | Not Available | Negative | 4428429 - 4429802 | 49866.0 |
| class 1 fructose-bisphosphatase | AM446_RS24580 | Not Available | Positive | 4429978 - 4430976 | 36836.0 |
| galactofuranose abc transporter, permease protein yjff | AM446_RS24585 | Not Available | Negative | 4431009 - 4432004 | 34994.0 |
| galactofuranose abc transporter, atp-binding protein ytft | AM446_RS24590 | Not Available | Negative | 4431991 - 4433013 | 35542.1 |
| galactofuranose abc transporter, atp-binding protein ytfr | AM446_RS24595 | Not Available | Negative | 4433027 - 4434529 | 55307.5 |
| galactofuranose abc transporter substrate-binding protein ytfq | AM446_RS24600 | Not Available | Negative | 4434662 - 4435618 | 34345.5 |
| inorganic diphosphatase | AM446_RS24605 | Not Available | Positive | 4435928 - 4436458 | 19704.6 |
| endoribonuclease toxin chpb | AM446_RS24610 | Not Available | Negative | 4436537 - 4436887 | 12454.2 |
| type ii toxin-antitoxin system antitoxin chps | AM446_RS24615 | Not Available | Negative | 4436881 - 4437132 | 9332.18 |
Pathways
1427 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





