Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain AR_0067 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Genome Summary
Escherichia coli strain AR_0067 chromosome, complete genome.
Gene Summary
Adenine Count
1257791 bp
Thymine Count
1263606 bp
Guanine Count
1302961 bp
Cytosine Count
1295195 bp
Genome Length
5119553 bp
Protein-coding Genes
4512 genes
Non-Coding Genes
475 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| mgta regulatory leader peptide mgtl | AM446_RS24515 | Not Available | Negative | 4417384 - 4417437 | 2122.69 |
| trehalose operon repressor trer | AM446_RS24520 | Not Available | Positive | 4417622 - 4418569 | 34575.8 |
| pts trehalose transporter subunit iibc | AM446_RS24525 | Not Available | Positive | 4418688 - 4420109 | 51135.0 |
| alpha,alpha-phosphotrehalase | AM446_RS24530 | Not Available | Positive | 4420159 - 4421814 | 63723.9 |
| anaerobic ribonucleoside-triphosphate reductase | AM446_RS24535 | Not Available | Positive | 4422208 - 4424346 | 80043.0 |
| anaerobic ribonucleoside-triphosphate reductase-activating protein | AM446_RS24540 | Not Available | Positive | 4424531 - 4424995 | 17430.9 |
| type ii toxin-antitoxin system rele family toxin | AM446_RS24545 | Not Available | Negative | 4424996 - 4425286 | 11367.8 |
| type ii toxin-antitoxin system relb/dinj family antitoxin | AM446_RS24550 | Not Available | Negative | 4425276 - 4425518 | 9126.09 |
| cytochrome b562 | AM446_RS24560 | Not Available | Negative | 4425710 - 4426096 | 13989.7 |
| metalloprotease pmba | AM446_RS24565 | Not Available | Negative | 4426280 - 4427632 | 48358.4 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





