Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain AR_0067 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Genome Summary
Escherichia coli strain AR_0067 chromosome, complete genome.
Gene Summary
Adenine Count
1257791 bp
Thymine Count
1263606 bp
Guanine Count
1302961 bp
Cytosine Count
1295195 bp
Genome Length
5119553 bp
Protein-coding Genes
4512 genes
Non-Coding Genes
475 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rna polymerase sigma factor feci | AM446_RS24230 | Not Available | Positive | 4364952 - 4365473 | 19481.5 |
| ferric citrate uptake sigma factor regulator fecr | AM446_RS24235 | Not Available | Positive | 4365470 - 4366423 | 35564.1 |
| tonb-dependent fe(3+) dicitrate receptor feca | AM446_RS24240 | Not Available | Positive | 4366510 - 4368834 | 85312.3 |
| fe(3+) dicitrate abc transporter substrate-binding protein fecb | AM446_RS24245 | Not Available | Positive | 4368879 - 4369781 | 33108.1 |
| iron-dicitrate abc transporter permease fecc | AM446_RS24250 | Not Available | Positive | 4369778 - 4370776 | 34894.9 |
| fe(3+) dicitrate abc transporter permease subunit fecd | AM446_RS24255 | Not Available | Positive | 4370773 - 4371729 | 34133.7 |
| fe(3+) dicitrate abc transporter atp-binding protein fece | AM446_RS24260 | Not Available | Positive | 4371730 - 4372497 | 28192.5 |
| hypothetical protein | AM446_RS28705 | Not Available | Negative | 4373054 - 4373311 | 9465.12 |
| sugar transporter | AM446_RS24270 | Not Available | Negative | 4373394 - 4374178 | 28432.4 |
| is3-like element is600 family transposase | AM446_RS24275 | Not Available | Positive | 4374245 - 4375401 | 44480.2 |
Pathways
1427 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





